Stem-loop pab-MIR3709a

Accession

MI0016111

Description

Picea abies pab-MIR3709a precursor miRNA

Gene family

MIPF0001154; MIR3709

Sequence

aaauucaagaauuUCAGAUGCUUUAAAUUCCCGAcagauucuugcgaugaccaaauggauuucgggauuuaaauuauuuuaaauucccga
........((((((.(((((.(((((((.(((((..(((((...............))))))))))))))))).))))).))))))....

Structure

aaauucaa      C     C       U     ca     uugcga 
        gaauuU AGAUG UUUAAAU CCCGA  gauuc      u
        |||||| ||||| ||||||| |||||  |||||      g
        cuuaaa uuuau aaauuua gggcu  uuagg      a
----agcc      u     u       -     --     uaaacc 

Annotation confidence Not enough data

Genome context

MA_480696: 4753-4842 [-]

Mature pab-miR3709a

• Accession: MIMAT0018141
• Description: Picea abies pab-miR3709a mature miRNA
• Sequence: 14 - UCAGAUGCUUUAAAUUCCCGA - 34
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169