Stem-loop pab-MIR3711

Accession

MI0016114

Description

Picea abies pab-MIR3711 precursor miRNA

Sequence

aaaUGGCGCUAGAAGGAGGGCCUgaaaauuauuaauggcacaaggcagucguaagacuccuccaccacccaacugcucaccuauagugacaagaagucauuaaaaugauaacaucaucccucaaacaacaacca
...(((.........(((((..(((..((((((((((((...(((.((((....)))))))...........((..((((.....))))..))..)))))))..)))))....))).))))).........)))

Structure

aaa   CGCUAGAAG     CC   --aa     --       -------------------------------aca   c    g 
   UGG         GAGGG  Uga    auuau  uaauggc                                  agg aguc u
   |||         |||||  |||    |||||  |||||||                                  ||| ||||  
   acc         cuccc  acu    uagua  auuacug                                  ucc ucag a
---   aacaacaaa     -u   acaa     aa       aagaacagugauauccacucgucaacccaccacc   -    a 

Annotation confidence Not enough data

Genome context

MA_109350: 12219-12352 [-]

Mature pab-miR3711

• Accession: MIMAT0018144
• Description: Picea abies pab-miR3711 mature miRNA
• Sequence: 4 - UGGCGCUAGAAGGAGGGCCU - 23
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169