Stem-loop pab-MIR482b

Accession

MI0016127

Description

Picea abies pab-MIR482b precursor miRNA

Gene family

MIPF0000403; MIR482

Literature search

1 open access papers mention pab-MIR482b
(5 sentences)

Sequence

auguggauggaagucuugaggauugggaggauaggagaaggcuguuugcuuaauuaucaguugaaaccugauuagUCUUCCCUAUUCCUCCCAUUCCuauugccuccaucacacaucccuu
(((((((((((.((....((((.((((((((((((.((((((((...........(((((.......))))))))))))))))).)))))))).))))...)).)))))).))))).....

Structure

-----     -      a  cuug    u        -    a        uuugcuuaauu     uu 
     augug gaugga gu    agga ugggagga uagg gaaggcug           aucag  g
     ||||| |||||| ||    |||| |||||||| |||| ||||||||           |||||  a
     uacac cuaccu cg    uCCU ACCCUCCU AUCC CUUCUgau           uaguc  a
uuccc     a      c  -uua    U        U    -        -----------     ca 

Annotation confidence Not enough data

Genome context

MA_75889: 12386-12506 [-]

Mature pab-miR482b

• Accession: MIMAT0018157
• Description: Picea abies pab-miR482b mature miRNA
• Sequence: 76 - UCUUCCCUAUUCCUCCCAUUCC - 97
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169