Stem-loop pab-MIR1863

Accession

MI0016133

Description

Picea abies pab-MIR1863 precursor miRNA

Sequence

ucuugccaugacagagaucaucuccugaucugcaaaaacaauuacccaguguaggaacuacgugggcucaaggcuucuucuugagcuucuucacguccauAGCUCUGGUACCAUGUUAGAUUuuaggguaauaaugcagaacagua
.............((((...))))(((.((((((......(((((((....(((((.((((((((((((((((.....))))))))..........(((......)))..))))).))).))))))))))))..)))))).)))..

Structure

ucuugccaugacagagaucaucuc   a      aaaaca       agug     a   -     gcucaaggcuucuucuugagcuucuucacgu   uA 
                        cug ucugca      auuaccc    uagga cua cgugg                               cca  G
                        ||| ||||||      |||||||    ||||| ||| |||||                               |||   
                        gac agacgu      uaauggg    auuUU GAU GUACC                               GGU  C
----------------------au   a      ----aa       ----     A   U     -----------------------------AU   CU 

Annotation confidence Not enough data

Genome context

MA_8356382: 76-221 [-]

Mature pab-miR1863

• Accession: MIMAT0018163
• Description: Picea abies pab-miR1863 mature miRNA
• Sequence: 101 - AGCUCUGGUACCAUGUUAGAUU - 122
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 20561211
   MicroRNAs, the epigenetic memory and climatic adaptation in Norway spruce
   "Yakovlev IA, Fossdal CG, Johnsen O"
   "New Phytol (2010) 187:1154-1169