Stem-loop sequence ame-mir-1175

Accession MI0016137
Description Apis mellifera miR-1175 stem-loop
Gene family MIPF0000715; mir-1175
Stem-loop 
caa          --------u   c     ----        u  uuc    -    a     -   uua         
   aaauaaauaa         aug aagaa    agggauua gg   aagu ggag agugg ucu   cgcuuuga 
   ||||||||||         ||| |||||    |||||||| ||   |||| |||| ||||| |||   ||||||| a
   uuuguuuauu         ugc uucuu    ucccuagu cc   uuca ccuc ucacu aga   gugaaauu 
--c          uuuuuuuuu   -     auaa        -  uca    a    c     u   ---
Get sequence
Deep sequencing
93 reads, 1 experiments
Genome context
Coordinates (Amel_4.0) Overlapping transcripts
GroupUn.8772: 2090-2227 [+]
intergenic
Clustered miRNAs
< 10kb from ame-mir-1175
ame-mir-750 GroupUn.8772: 1934-2069 [+]
ame-mir-1175 GroupUn.8772: 2090-2227 [+]
Database links

Mature sequence ame-miR-1175

Accession MIMAT0018507
Sequence

73 -  

ugagauucacuccuccaacuuac

 - 95

Get sequence
Deep sequencing 2 reads, 1 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).