miRBase entry: ame-mir-3717

Stem-loop ame-mir-3717


Accession
MI0016142
Description
Apis mellifera ame-mir-3717 precursor miRNA


Sequence

uuggagaggUGAGAGAAAAAGAGAGUGUCGGggugggacguuugauaaaauugcugucacacgaauucucauuuuuccuugucgcuug
......((((((.(((((((((((((.(((..((((.(.((((....))))...).)))).))))))))).))))))..).)))))).

Structure
uuggag      G --      -      G   Gg    g --c    g 
      aggUGA A  GAAAAA GAGAGU UCG  gugg a   guuu a
      |||||| |  |||||| |||||| |||  |||| |   ||||  
      uucgcu u  cuuuuu cucuua agc  cacu u   uaaa u
-----g      g uc      a      -   -a    g cgu    a 


Annotation confidence Not enough data
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Genome context
CM000059.5: 4741881-4741968 [-]

Database links

Mature ame-miR-3717-5p

Accession MIMAT0018512
Description Apis mellifera ame-miR-3717-5p mature miRNA
Sequence 10 - UGAGAGAAAAAGAGAGUGUCGG - 31
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226