miRBase entry: ame-mir-3747b

Stem-loop ame-mir-3747b


Accession
MI0016146
Description
Apis mellifera ame-mir-3747b precursor miRNA
Gene family
MIPF0001223; mir-3747


Sequence

uacccagugccaguucUGCGAGAUUUCUUUUCAGUCGUGaauaaaaauauuauucacugcuggaaaaaaaucucgcggaaaaaauacacgaucugauuggu
...(((((..((((((((((((((((.((((((((.((((((((.....)))))))).)))))))).)))))))))))))............)))))))).

Structure
uac     gc   ------------             C        C        a 
   ccagu  cag            uucUGCGAGAUUU UUUUCAGU GUGaauaa a
   |||||  |||            ||||||||||||| |||||||| |||||||| a
   gguua  guc            aaggcgcucuaaa aaaggucg cacuuauu u
--u     --   uagcacauaaaa             a        u        a 


Annotation confidence Not enough data
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Genome context
CM000061.5: 13108273-13108373 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ame-mir-3747b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-3747b-5p

Accession MIMAT0018516
Description Apis mellifera ame-miR-3747b-5p mature miRNA
Sequence 17 - UGCGAGAUUUCUUUUCAGUCGUG - 39
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805