miRBase entry: ame-mir-3718a

Stem-loop ame-mir-3718a


Accession
MI0016150
Description
Apis mellifera ame-mir-3718a precursor miRNA
Gene family
MIPF0001225; mir-3718


Sequence

uugaaagucguucccgauuuacauuaucggaucaggauaggguagggcagggccauuucgguauaaccauucugUCCCCUGUCCUGUCCCGAUAGugagaaucgguacugaaucgaaauuaugaacgacuguuuauucau
.(((((((((((((((((((.(((((((((..((((((((((...(((((((((.....)))........))))))))))))))))..))))))))).))))))).................)))))))).....)))).

Structure
u    -----        -----------------       a         au          uag      --------   a 
 ugaa     agucguuc                 ccgauuu cauuaucgg  caggauaggg   ggcagg        gcc u
 ||||     ||||||||                 ||||||| |||||||||  ||||||||||   ||||||        ||| u
 acuu     ucagcaag                 ggcuaag guGAUAGCC  GUCCUGUCCC   CUgucu        ugg u
u    auuug        uauuaaagcuaagucau       a         CU          ---      uaccaaua   c 


Annotation confidence Not enough data
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Genome context
CM000059.5: 6820223-6820362 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ame-mir-3718a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-3718a-3p

Accession MIMAT0018520
Description Apis mellifera ame-miR-3718a-3p mature miRNA
Sequence 75 - UCCCCUGUCCUGUCCCGAUAG - 95
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805