miRBase entry: ame-mir-3751

Stem-loop ame-mir-3751


Accession
MI0016151
Description
Apis mellifera ame-mir-3751 precursor miRNA


Sequence

aauguuugucgcguauugaccggccauccaacgcgguggcaccccgagaauuucgaaaacugcaauugcauagacagagcgaugcaugacgguuuacuucggGGGUGGUGGUGGAAGUCGGGGggagugaaaaggag
..(.(((.((((.......(((((..((((.(((.....((((((..(((....(.((((((((..(((((.(......).))))))).)))))).)))).))))))))).)))).))))).....)))).))).).

Structure
aa g   g    guauuga     ca    a   ggugg      ga   uuuc a      -  au     a ac 
  u uuu ucgc       ccggc  ucca cgc     cacccc  gaa    g aaacug ca  ugcau g  a
  | ||| ||||       |||||  |||| |||     ||||||  |||    | |||||| ||  ||||| |   
  a gaa agug       GGCUG  AGGU GUG     GUGGGg  cuu    c uuuggc gu  acgua c  g
-g g   a    --aggGG     -A    G   -----      -g   ---- a      a  --     g ga 


Annotation confidence Not enough data
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Genome context
CM000062.5: 8355801-8355937 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ame-mir-3751
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-3751-3p

Accession MIMAT0018521
Description Apis mellifera ame-miR-3751-3p mature miRNA
Sequence 103 - GGGUGGUGGUGGAAGUCGGGG - 123
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226