miRBase entry: ame-mir-3720

Stem-loop ame-mir-3720


Accession
MI0016168
Description
Apis mellifera ame-mir-3720 precursor miRNA


Sequence

cugagguucAUACGGUGAUGAGUUUAAACAGuuuacacccgagucugguuucgaucgaaccucaauuuucuggggaucucguuccagauuaugaaagaguaaacguuuguagagucauaguuacgcugaguaugaacuuc
..(((((((((((((((((((.((((....((((((.(.(((((((((...(((..((.(((((......))))).)))))..))))))).))...).)))))).....)))).)))).....))))..)))))))))))

Structure
cu           --    -----    G    -AACA      a --c  -       uuu   uc  a     au 
  gagguucAUAC  GGUG     AUGA UUUA     Guuuac c   cg agucugg   cga  ga ccuca  u
  |||||||||||  ||||     |||| ||||     |||||| |   || |||||||   |||  || |||||   
  cuucaaguaug  ucgc     uacu agau     caaaug g   gu uuagacc   gcu  cu ggggu  u
--           ag    auuga    g    guuug      a aaa  a       -uu   --  a     cu 


Annotation confidence Not enough data
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Genome context
CM000059.5: 7680289-7680428 [+]

Database links

Mature ame-miR-3720-5p

Accession MIMAT0018538
Description Apis mellifera ame-miR-3720-5p mature miRNA
Sequence 10 - AUACGGUGAUGAGUUUAAACAG - 31
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805