miRBase entry: ame-mir-3793

Stem-loop ame-mir-3793


Accession
MI0016207
Description
Apis mellifera ame-mir-3793 precursor miRNA


Sequence

uuUGAGCGUGUUUUCCCUGGACUGgucuaucugucgcgcgaucuugacgugguggaccuagcgccagaagaaacucguuuc
...(((((.(((((..((((.(((((((((((((((........))))).)))))))).))..))))..))))).))))).

Structure
uuU     U     CC    -A  -        -     cgc 
   GAGCG GUUUU  CUGG  CU Ggucuauc ugucg   g
   ||||| |||||  ||||  || |||||||| |||||    
   uuugc caaag  gacc  ga ccaggugg gcagu   a
--c     u     aa    gc  u        u     ucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000068.5: 1064043-1064123 [-]

Database links

Mature ame-miR-3793-5p

Accession MIMAT0018577
Description Apis mellifera ame-miR-3793-5p mature miRNA
Sequence 3 - UGAGCGUGUUUUCCCUGGACUG - 24
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226