Stem-loop sequence ame-mir-3477

Accession MI0016213
Description Apis mellifera miR-3477 stem-loop
Gene family MIPF0001227; mir-3477
Stem-loop
-uu       guu  a     u         c     c       gug  a 
   ugguagc   gg guggg aaucucaug gguaa ugugagu   ug a
   |||||||   || ||||| ||||||||| ||||| |||||||   || u
   accauug   cc caccc uuggggugc ccauu auacucg   au u
auu       ---  -     u         u     -       aaa  g 
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Genome context
Coordinates (Amel_4.0) Overlapping transcripts
Group2.17: 22925-23023 [-]
intergenic
Clustered miRNAs
< 10kb from ame-mir-3477
ame-mir-283 Group2.17: 23695-23794 [-]
ame-mir-3477 Group2.17: 22925-23023 [-]
ame-mir-12 Group2.17: 22430-22512 [-]
Database links

Mature sequence ame-miR-3477

Accession MIMAT0018583
Sequence

21 - 

uaaucucaugcgguaacugugag

 - 43

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Evidence experimental; SOLID [1]

References

1
PMID:20807255 "Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera" Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F Insect Mol Biol. 19:799-805(2010).