miRBase entry: ame-mir-3723

Stem-loop ame-mir-3723


Accession
MI0016219
Description
Apis mellifera ame-mir-3723 precursor miRNA


Sequence

gaccggaagucacuauuuucggaguuACAGCGUUUCAAAGUUUUCGUAaauguaaauguuuaaaaaucggaaacccuuuguuucacacgacgauaucuccggaaccgga
..((((..........((((((((.((..((((..((((((((((((((((......))))).....)))))))..))))......))).)..)).)))))))))))).

Structure
ga    aagucacuau        u  CA -   ----UU    --       -----     gu 
  ccgg          uuucggag uA  G CGU      CAAA  GUUUUCG     UAaau  a
  ||||          |||||||| ||  | |||      ||||  |||||||     |||||   
  ggcc          aaggccuc au  c gca      guuu  caaaggc     auuug  a
-a    ----------        u  ag a   cacuuu    cc       uaaaa     ua 


Annotation confidence Not enough data
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Genome context
CM000060.5: 4545994-4546102 [+]

Database links

Mature ame-miR-3723-5p

Accession MIMAT0018589
Description Apis mellifera ame-miR-3723-5p mature miRNA
Sequence 27 - ACAGCGUUUCAAAGUUUUCGUA - 48
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805