miRBase entry: ame-mir-3724

Stem-loop ame-mir-3724


Accession
MI0016220
Description
Apis mellifera ame-mir-3724 precursor miRNA


Sequence

uucugauaauuuaaauccguuuucgauucauggauagaacgaaugaguagaauauuugguuaaugaauacauaauuaagcucaaguguuuuucaaaauguuuaauuugagaaaAUCGUGGUAAACUUUGAAUAUAuaaga
.(((.((((((((((........((((((.(((((.(((((..((((..(((((((((((((((.........))).))).)))))))))))))...))))).))))).))..))))........))))))).))).)))

Structure
u   g   -       uccguuuu    --  a     a     -aa    ua         -   -   gaa 
 ucu aua auuuaaa        cgau  uc uggau gaacg   ugag  gaauauuug guu aau   u
 ||| ||| |||||||        ||||  || ||||| |||||   ||||  ||||||||| ||| |||   a
 aga uAU UAAGUUU        GCUA  ag guuua uuugu   acuu  uuugugaac cga uua   c
-   a   A       CAAAUGGU    aa  a     a     aaa    --         u   a   aua 


Annotation confidence Not enough data
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Genome context
CM000060.5: 7466388-7466527 [+]

Database links

Mature ame-miR-3724-3p

Accession MIMAT0018590
Description Apis mellifera ame-miR-3724-3p mature miRNA
Sequence 114 - AUCGUGGUAAACUUUGAAUAUA - 135
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805