miRBase entry: ame-mir-3736

Stem-loop ame-mir-3736


Accession
MI0016235
Description
Apis mellifera ame-mir-3736 precursor miRNA

Literature search
1 open access papers mention ame-mir-3736
(1 sentences)

Sequence

cgagaucugcguccucggCGAUUACCCUGAGUAUGCUCCgaugcauaggcguguccuccgcgacgguggccucguacuuggucggguagaagaggggguucaggucg
...(((((((.(((((.....(((((((((((((((((((.(((..(((.....)))..))).))).)))...)))))))...))))))..))))).)..)))))).

Structure
cga      -- g     ggCGA      ---       ---   -   a   au   c 
   gaucug  c uccuc     UUACCC   UGAGUAU   GCU CCg ugc  agg g
   ||||||  | |||||     ||||||   |||||||   ||| ||| |||  ||| u
   cuggac  g gggag     gauggg   guucaug   cgg ggc gcg  ucc g
--g      uu g     ---aa      cug       cuc   u   a   cc   u 


Annotation confidence Not enough data
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Genome context
CM000056.5: 11979270-11979376 [-]

Database links

Mature ame-miR-3736-5p

Accession MIMAT0018605
Description Apis mellifera ame-miR-3736-5p mature miRNA
Sequence 19 - CGAUUACCCUGAGUAUGCUCC - 39
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226