miRBase entry: ame-mir-3741

Stem-loop ame-mir-3741


Accession
MI0016240
Description
Apis mellifera ame-mir-3741 precursor miRNA


Sequence

accgauuaaugauacccacacggcucuuucgauaauauugauggcccccucguguaccuuugcaagaauaucucggggauacgagagggaaaaACGAGAGGGGGAGAGAGAAGUAugggacuuuuauguaaugga
..(.((((((((..((((.((..(((((((..............(((((((((...(((...........(((((......))))))))....))))).)))))))))))..)).))))....)))).)))).).

Structure
ac g    -    --ua    c  gg       gauaauauugaugg    -     -gua   uugcaagaaua     gg 
  c auua auga    ccca ac  cucuuuc              cccc cucgu    ccu           ucucg  g
  | |||| ||||    |||| ||  |||||||              |||| |||||    |||           |||||   
  g uaau uauu    gggu UG  GAGAGAG              GGGG GAGCA    ggg           agagc  a
-a g    g    uuca    A  AA       --------------    A     aaaa   -----------     au 


Annotation confidence Not enough data
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Genome context
CM000063.5: 9905912-9906046 [+]

Database links

Mature ame-miR-3741-3p

Accession MIMAT0018610
Description Apis mellifera ame-miR-3741-3p mature miRNA
Sequence 94 - ACGAGAGGGGGAGAGAGAAGUA - 115
Evidence experimental
SOLID [1], Illumina [2]

References

  1. PubMed ID: 20807255
    Next-generation small RNA sequencing for microRNAs profiling in the honey bee Apis mellifera
    "Chen X, Yu X, Cai Y, Zheng H, Yu D, Liu G, Zhou Q, Hu S, Hu F"
    "Insect Mol Biol (2010) 19:799-805

  2. PubMed ID: 26853694
    MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)
    "Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL"
    "Insect Mol Biol (2016) 25:216-226