Accession
MI0016282
Description
Tribolium castaneum
tca-mir-3822 precursor miRNA
Sequence
aaaauauaauauuuuauuuuagaacugacaauagcuguaguucguuuCGAGGUGUUGCACAGUUAAUAUUGuaccuuaaagcaAUAUUUUCUGUGUGAACCUCGgauuggacuuuggauuuucaacuuuuguccuggauuuacgauuaaaaauauuguugaua
.....(((((((((((((.((((.(((((((.(((((.((((((.((((((((.((((((((..((((((((........))))))))..)))))))))))))))).)))))).)))........)).)))))..)).)))).)))..)))))))))).....
.....(((((((((((((.((((.(((((((.(((((.((((((.((((((((.((((((((..((((((((........))))))))..)))))))))))))))).)))))).)))........)).)))))..)).)))).)))..)))))))))).....
Structure
aaaau -- u a -- u -------- u u G UU acc
auaauauuuu auu uaga cu gacaa ag cug aguucg uuCGAGGU UUGCACAG AAUAUUGu u
|||||||||| ||| |||| || ||||| || ||| |||||| |||||||| |||||||| ||||||||
uguuauaaaa uag auuu gg cuguu uc ggu ucaggu agGCUCCA AGUGUGUC UUAUAacg u
auagu au c a uc u aacuuuua u u - UU aaa
Annotation confidence
Not enough data
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Genome context
ChLGX: 5787677-5787839 [-]
Clustered miRNAs
36 other miRNAs are < 10 kb from tca-mir-3822
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tca-miR-3822-5p
| Accession | MIMAT0018670 |
| Description | Tribolium castaneum tca-miR-3822-5p mature miRNA |
| Sequence | 48 - CGAGGUGUUGCACAGUUAAUAUUG - 71 |
| Evidence |
experimental
SOLID [1] |
| Database links |
|
Mature tca-miR-3822-3p
| Accession | MIMAT0018671 |
| Description | Tribolium castaneum tca-miR-3822-3p mature miRNA |
| Sequence | 84 - AUAUUUUCUGUGUGAACCUCG - 104 |
| Evidence |
experimental
SOLID [1] |
| Database links |
|
References
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