miRBase entry: tca-mir-3830

Stem-loop tca-mir-3830


Accession
MI0016292
Description
Tribolium castaneum tca-mir-3830 precursor miRNA


Sequence

gaagcguggugCUCGGUGCGGCACCGGCAUuaugguggaagacaaauauUUGGCCUCGGUCGCGUUGGgagccgccauu
.....(((((.(((((((((((...(((...(((.((.....))..)))...)))...))))))))))).)))))....

Structure
gaagc     g           ACC   AUu   -g  g 
     guggu CUCGGUGCGGC   GGC   aug  ug a
     ||||| |||||||||||   |||   |||  || a
     cgccg gGGUUGCGCUG   CCG   uau  ac g
-uuac     a           GCU   GUU   aa  a 


Annotation confidence Not enough data
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Genome context
ChLGX: 3595260-3595338 [-]

Database links

Mature tca-miR-3830-5p

Accession MIMAT0018690
Description Tribolium castaneum tca-miR-3830-5p mature miRNA
Sequence 12 - CUCGGUGCGGCACCGGCAU - 30
Evidence experimental
SOLID [1]

Mature tca-miR-3830-3p

Accession MIMAT0018691
Description Tribolium castaneum tca-miR-3830-3p mature miRNA
Sequence 50 - UUGGCCUCGGUCGCGUUGG - 68
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696