miRBase entry: tca-mir-3837

Stem-loop tca-mir-3837


Accession
MI0016301
Description
Tribolium castaneum tca-mir-3837 precursor miRNA


Sequence

aaaAACAUUUGUCUAAUAAAUAAAUcuugagacguuuuuuuaaacuuguuaagacauuaugagcgagagugagauauugucggAAGAUUGUUUUUAUGAAAGugaacag
.....(((((.((....(((..((((((..((((...(((((..((((((...........))))))..)))))...))))..))))))..)))...))))))).....

Structure
aaaAA     G  UAAU   UA      ga    uuu     aa      aaga 
     CAUUU UC    AAA  AAUcuu  gacg   uuuua  cuuguu    c
     ||||| ||    |||  ||||||  ||||   |||||  ||||||    a
     guGAA AG    UUU  UUAGAA  cugu   agagu  gagcga    u
gacaa     -  -UAU   UG      gg    uau     ga      guau 


Annotation confidence Not enough data
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Genome context
ChLG2: 2554348-2554456 [+]

Database links

Mature tca-miR-3837-5p

Accession MIMAT0018708
Description Tribolium castaneum tca-miR-3837-5p mature miRNA
Sequence 4 - AACAUUUGUCUAAUAAAUAAAU - 25
Evidence experimental
SOLID [1]

Mature tca-miR-3837-3p

Accession MIMAT0018709
Description Tribolium castaneum tca-miR-3837-3p mature miRNA
Sequence 84 - AAGAUUGUUUUUAUGAAAG - 102
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696