Stem-loop sequence tca-mir-3851a-1

Accession MI0016326
Description Tribolium castaneum miR-3851a-1 stem-loop
Gene family MIPF0001201; mir-3851
Stem-loop 
cggac     a        gc c                a        guuuug 
     gaauu ugaauuug  g cgaguugauuuggagu guacuaug      g
     ||||| ||||||||  | |||||||||||||||| ||||||||       
     cuuaa auuuaaac  u gcucagcuaagccuua caugauac      g
aacaa     -        aa u                -        acucau
Get sequence
Deep sequencing
3818 reads, 2 experiments
Genome context
Coordinates (Tcas3.0) Overlapping transcripts
chrLG5: 349900-350007 [-]
intergenic
Clustered miRNAs
< 10kb from tca-mir-3851a-1
tca-mir-3851a-1 chrLG5: 349900-350007 [-]
tca-mir-3851b chrLG5: 349503-349610 [-]
Database links

Mature sequence tca-miR-3851a-5p

Accession MIMAT0018758
Sequence

26 -  

aguugauuuggaguaguacuaug

 - 48

Get sequence
Deep sequencing 162 reads, 2 experiments
Evidence experimental; SOLID [1]

Mature sequence tca-miR-3851a-3p

Accession MIMAT0018759
Sequence

65 -  

uaguacauuccgaaucgacucg

 - 86

Get sequence
Deep sequencing 7464 reads, 2 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20817720 "Functional shifts in insect microRNA evolution" Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S Genome Biol Evol. 2:686-696(2010).