miRBase entry: tca-mir-3860

Stem-loop tca-mir-3860


Accession
MI0016344
Description
Tribolium castaneum tca-mir-3860 precursor miRNA


Sequence

uagUAGCACUGGACGAUCUAAacaugucuucuuuaaugaagUUGUGUAAAGGAAACAGUGCAaaau
.....((((((.....(((..((((..((((......))))..))))..)))...)))))).....

Structure
uagUA      GACGA   AA    gu    uu 
     GCACUG     UCU  acau  cuuc  u
     ||||||     |||  ||||  ||||   
     CGUGAC     GGA  UGUG  gaag  a
uaaaA      --AAA   AA    UU    ua 


Annotation confidence Not enough data
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Genome context
ChLG7: 1491181-1491246 [-]

Database links

Mature tca-miR-3860-5p

Accession MIMAT0018792
Description Tribolium castaneum tca-miR-3860-5p mature miRNA
Sequence 4 - UAGCACUGGACGAUCUAA - 21
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-3860-3p

Accession MIMAT0018793
Description Tribolium castaneum tca-miR-3860-3p mature miRNA
Sequence 42 - UUGUGUAAAGGAAACAGUGCA - 62
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696