Stem-loop tca-mir-375

Accession

MI0016345

Description

Tribolium castaneum tca-mir-375 precursor miRNA

Gene family

MIPF0000114; mir-375

Literature search

1 open access papers mention tca-mir-375
(2 sentences)

Sequence

ucaaacugACUUGAGCCUUGCGAAUAAuuccuaauuuaaagagcgaUUUGUUCGUGUGGCUCGAGUUAgauaaa
.....((((((((((((..((((((((.((((.........)).)).))))))))..)))))))))))).....

Structure

ucaaa            UU        u  -  aau 
     cugACUUGAGCC  GCGAAUAA uc cu   u
     ||||||||||||  |||||||| || ||   u
     gAUUGAGCUCGG  UGCUUGUU ag ga   a
aaaua            UG        U  c  gaa 

Annotation confidence Not enough data

Genome context

ChLG8: 12770476-12770549 [-]

Mature tca-miR-375-5p

• Accession: MIMAT0018794
• Description: Tribolium castaneum tca-miR-375-5p mature miRNA
• Sequence: 9 - ACUUGAGCCUUGCGAAUAA - 27
• Evidence: experimental ; SOLID [1]

Mature tca-miR-375-3p

• Accession: MIMAT0018795
• Description: Tribolium castaneum tca-miR-375-3p mature miRNA
• Sequence: 47 - UUUGUUCGUGUGGCUCGAGUUA - 68
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696