miRBase entry: tca-mir-3863

Stem-loop tca-mir-3863


Accession
MI0016352
Description
Tribolium castaneum tca-mir-3863 precursor miRNA


Sequence

ugccagggugugaagaauUGAUCAAGUAGCGCCGCUUGGUCuuugaauugauugaUCAGCGUCGUUGCUUGAUCCAUucucugcauccacaau
.....(((((((.(((((.((((((((((((.((((.((((..(......)..)))))))).)))))))))))).))))).))))))).....

Structure
ugcca       a     U            C    U    uu ga 
     gggugug agaau GAUCAAGUAGCG CGCU GGUC  u  a
     ||||||| ||||| |||||||||||| |||| ||||  |   
     ccuacgu ucuUA CUAGUUCGUUGC GCGA CUag  a  u
uaaca       c     C            U    -    uu gu 


Annotation confidence Not enough data
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Genome context
ChLG9: 13734623-13734715 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tca-mir-3863
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tca-miR-3863-5p

Accession MIMAT0018808
Description Tribolium castaneum tca-miR-3863-5p mature miRNA
Sequence 19 - UGAUCAAGUAGCGCCGCUUGGUC - 41
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-3863-3p

Accession MIMAT0018809
Description Tribolium castaneum tca-miR-3863-3p mature miRNA
Sequence 56 - UCAGCGUCGUUGCUUGAUCCAU - 77
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696