miRBase entry: tca-mir-3868

Stem-loop tca-mir-3868


Accession
MI0016362
Description
Tribolium castaneum tca-mir-3868 precursor miRNA


Sequence

guaaacggaauuaaaguACCAGCACCAGUAUGUAUUuuguaugcauucuuuuuacaacaauuuaugcaacaagaaAUCAACUAAAGUUUAAUUUugauucugauggu
.....((((((((((((...(((...(((..((.((((((.(((((.................))))))))))).))..)))...)))..)))))))))))).....

Structure
guaaa            ACC   ACC   AU  A      a     ucuuuuu 
     cggaauuaaagu   AGC   AGU  GU UUuugu ugcau       a
     ||||||||||||   |||   |||  || |||||| |||||       c
     gucuuaguUUUA   UUG   UCA  UA agaaca acgua       a
uggua            -AU   AAA   AC  a      -     uuuaaca 


Annotation confidence Not enough data
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Genome context
ChLG3: 20947488-20947594 [-]

Database links

Mature tca-miR-3868-5p

Accession MIMAT0018828
Description Tribolium castaneum tca-miR-3868-5p mature miRNA
Sequence 18 - ACCAGCACCAGUAUGUAUU - 36
Evidence experimental
SOLID [1]

Mature tca-miR-3868-3p

Accession MIMAT0018829
Description Tribolium castaneum tca-miR-3868-3p mature miRNA
Sequence 76 - AUCAACUAAAGUUUAAUUU - 94
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696