miRBase entry: tca-mir-3875

Stem-loop tca-mir-3875


Accession
MI0016369
Description
Tribolium castaneum tca-mir-3875 precursor miRNA


Sequence

cacuuGCGUCUUUAGCUCAAUAAAuauuagaggugcuuuauuugggccaaUAUUUGCGCUAGAUAGCGCguauu
.....((((.((((((.(((...(((((...(((.(.......).))))))))))).))))))..)))).....

Structure
cacuu    -C      U   UAA     aga   g uu 
     GCGU  UUUAGC CAA   Auauu   ggu c  u
     ||||  |||||| |||   |||||   ||| |  a
     CGCG  AGAUCG GUU   UAUaa   ccg g  u
uuaug    AU      C   ---     ---   g uu 


Annotation confidence Not enough data
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Genome context
ChLG8: 7779290-7779363 [-]

Database links

Mature tca-miR-3875-5p

Accession MIMAT0018842
Description Tribolium castaneum tca-miR-3875-5p mature miRNA
Sequence 6 - GCGUCUUUAGCUCAAUAAA - 24
Evidence experimental
SOLID [1]

Mature tca-miR-3875-3p

Accession MIMAT0018843
Description Tribolium castaneum tca-miR-3875-3p mature miRNA
Sequence 51 - UAUUUGCGCUAGAUAGCGC - 69
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696