miRBase entry: tca-mir-3884

Stem-loop tca-mir-3884


Accession
MI0016381
Description
Tribolium castaneum tca-mir-3884 precursor miRNA


Sequence

aaaACUGAAGCUGACGAGUUAACUGCCGGguacuuguUCCCGGAUUUUUUCCCCAGCCUCAAgaag
.....(((.((((..(((.......(((((........))))).....)))..)))).))).....

Structure
aaaAC   A    AC   UUAACUG     uac 
     UGA GCUG  GAG       CCGGg   u
     ||| ||||  |||       |||||    
     ACU CGAC  CUU       GGCCC   u
gaagA   C    CC   --UUUUA     Uug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unmapped1515: 1844-1909 [+]

Database links

Mature tca-miR-3884-5p

Accession MIMAT0018866
Description Tribolium castaneum tca-miR-3884-5p mature miRNA
Sequence 4 - ACUGAAGCUGACGAGUUAACUGCCGG - 29
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-3884-3p

Accession MIMAT0018867
Description Tribolium castaneum tca-miR-3884-3p mature miRNA
Sequence 38 - UCCCGGAUUUUUUCCCCAGCCUCAA - 62
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696