miRBase entry: tca-mir-3895

Stem-loop tca-mir-3895


Accession
MI0016394
Description
Tribolium castaneum tca-mir-3895 precursor miRNA


Sequence

cgauuuAUUGAGUUGAUUACGAUGGuaucggucuagcucucgaaguuccgcuguaaucggaacCGGAACCGGAAUCGCCUUGauaauagu
....((((((((.((((..((.((((.(((((.((((............))))..))))).))))....))..)))).))))))))....

Structure
cgau        U    UA  ---A    a     -c    ucucg 
    uuAUUGAG UGAU  CG    UGGu ucggu  uagc     a
    |||||||| ||||  ||    |||| |||||  ||||      
    aauaGUUC GCUA  GC    GCca ggcua  gucg     a
ugau        C    AG  CAAG    a     au    ccuug 


Annotation confidence Not enough data
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Genome context
ChLG8: 5754922-5755011 [+]

Database links

Mature tca-miR-3895-5p

Accession MIMAT0018892
Description Tribolium castaneum tca-miR-3895-5p mature miRNA
Sequence 7 - AUUGAGUUGAUUACGAUGG - 25
Evidence experimental
SOLID [1]

Mature tca-miR-3895-3p

Accession MIMAT0018893
Description Tribolium castaneum tca-miR-3895-3p mature miRNA
Sequence 64 - CGGAACCGGAAUCGCCUUG - 82
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696