Stem-loop sequence hsa-mir-3926-2

Accession

MI0016437 (change log)

Symbol

HGNC:MIR3926-2

Description

Homo sapiens miR-3926-2 stem-loop

Gene family

MIPF0001118; mir-3926

Stem-loop

                              gcu 
5' ggagcuggccaaaaagcaggcagagac   u
   |||||||||||||||||||||||||||   u
3' ccucgaccgguuuuucguccgucucug   u
                              aaa 

Deep sequencing

109 reads, 6.25 reads per million, 48 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr8: 12727237-12727299 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from hsa-mir-3926-2

• hsa-mir-5692a-2: chr8: 12719132-12719190 [+]
• hsa-mir-3926-1: chr8: 12727232-12727304 [-]
• hsa-mir-3926-2: chr8: 12727237-12727299 [+]

Database links

• EntrezGene:MIR3926-2
• HGNC:MIR3926-2
• RNAcentral:URS000075B704_9606
• miRBase Tracker:MI0016437

Mature sequence hsa-miR-3926

• Accession: MIMAT0018201
• Sequence: 6 - uggccaaaaagcaggcagaga - 26
• Deep sequencing: 217 reads, 48 experiments
• Evidence: experimental; Illumina [1-2]
• Database links:
  • RNAcentral:URS0000576DFF_9606
• Predicted targets:
  • TargetMiner:hsa-miR-3926
  • TargetScanVert:hsa-miR-3926
  • miRDB:hsa-miR-3926

References

1. PMID:20224791 "Discovery of novel microRNAs in female reproductive tract using next generation sequencing" Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH PLoS One. 5:e9637(2010).
2. PMID:21199797 "Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene" Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C Cancer Res. 71:78-86(2011).