miRBase entry: dpu-mir-305

Stem-loop dpu-mir-305


Accession
MI0016448
Description
Daphnia pulex dpu-mir-305 precursor miRNA


Sequence

aguagagaagugaccugcUUUGUACUUUAUCAGGUGCUCUguuugaaauuuaccucagggccccugugcaaguacauagcugguuguucucauccucgccga
....(((((..((((.(((.(((((((...((((.((((((..............)))))).))))...))))))).))).)))).)))))...........

Structure
-------agua     gu    u   U       UAU    U      uuugaa 
           gagaa  gacc gcU UGUACUU   CAGG GCUCUg      a
           |||||  |||| ||| |||||||   |||| ||||||       
           cucuu  uugg cga acaugaa   gucc cgggac      u
agccgcuccua     -g    u   u       cgu    c      uccauu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature dpu-miR-305

Accession MIMAT0018924
Description Daphnia pulex dpu-miR-305 mature miRNA
Sequence 19 - UUUGUACUUUAUCAGGUGCUCU - 40
Evidence not_experimental

References

  1. PubMed ID: 20702459
    A congruent solution to arthropod phylogeny: phylogenomics, microRNAs and morphology support monophyletic Mandibulata
    "Rota-Stabelli O, Campbell L, Brinkmann H, Edgecombe GD, Longhorn SJ, Peterson KJ, Pisani D, Philippe H, Telford MJ"
    "Proc Biol Sci (2011) 278:298-306