Stem-loop ttu-MIR160

Accession

MI0016454

Description

Triticum turgidum ttu-MIR160 precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

2 open access papers mention ttu-MIR160
(3 sentences)

Sequence

auaugaugUGCCUGGCUCCCUGUAUGCCAcucauccagagcaacaccuuuugcaauaagguugccugcgauggauggcgugcacggauccaagcauaucg
....(((((((.(((.(((.(((((((((.((((((((.(((..(((((.......))))))))))).))))).))))))))).))).))).))))))).

Structure

auau       C   C   C         c     -   a   ac     uu 
    gaugUGC UGG UCC UGUAUGCCA ucauc cag gca  accuu  g
    ||||||| ||| ||| ||||||||| ||||| ||| |||  |||||  c
    cuauacg acc agg acgugcggu gguag guc cgu  uggaa  a
---g       a   u   c         a     c   -   --     ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature ttu-miR160

• Accession: MIMAT0018212
• Description: Triticum turgidum ttu-miR160 mature miRNA
• Sequence: 9 - UGCCUGGCUCCCUGUAUGCCA - 29
• Evidence: not_experimental

References

1. PubMed ID: 18521122
   Data mining for miRNAs and their targets in the Triticeae
   "Dryanova A, Zakharov A, Gulick PJ"
   "Genome (2008) 51:433-443