miRBase entry: gma-MIR4355

Stem-loop gma-MIR4355


Accession
MI0016488
Description
Glycine max gma-MIR4355 precursor miRNA


Sequence

cugguacacccagcauaacauguguaauuccaauuuugaccuuccauaaagcugauacaaauugauaauccguaagcucaauacggauuggccaauccauuaucagcuuuacagaaaggcaaaaguggaauugCACUGUUGUGCUGGGUGUACCAgcaau
((((((((((((((((((((.(((((((((((.(((((.(((((..(((((((((((...((((.(((((((((.......)))))))))..))))....)))))))))))..).))))))))).)))))))))))))))))))))))))))))))....

Structure
----                    u           a     a    - ca           -caa    -a         ag 
    cugguacacccagcauaaca guguaauucca uuuug ccuu c  uaaagcugaua    auug  uaauccgua  c
    |||||||||||||||||||| ||||||||||| ||||| |||| |  |||||||||||    ||||  |||||||||  u
    gACCAUGUGGGUCGUGUUGU CACguuaaggu aaaac ggaa g  auuucgacuau    uaac  guuaggcau  c
uaac                    -           g     -    a ac           uacc    cg         aa 


Annotation confidence Not enough data
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Genome context
chr18: 1371151-1371310 [-]

Database links

Mature gma-miR4355

Accession MIMAT0018247
Description Glycine max gma-miR4355 mature miRNA
Sequence 134 - CACUGUUGUGCUGGGUGUACCA - 155
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14