miRBase entry: gma-MIR4380b

Stem-loop gma-MIR4380b


Accession
MI0016528
Description
Glycine max gma-MIR4380b precursor miRNA
Gene family
MIPF0001117; MIR4380

Literature search
1 open access papers mention gma-MIR4380b
(1 sentences)

Sequence

gcguacggaucaacaauccguaugaaccauauggauuggcaauccgUAUGGUCAUACGGAUUGUUGAUccguacgu
(((((((((((((((((((((((((.(((((((((((...))))))))))))))))))))))))))))))))))))

Structure
                         a           g 
gcguacggaucaacaauccguauga ccauauggauu  
||||||||||||||||||||||||| ||||||||||| g
ugcaugccUAGUUGUUAGGCAUACU GGUAUgccuaa  
                         -           c 


Annotation confidence Not enough data
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Genome context
chr19: 4425779-4425854 [+]

Database links

Mature gma-miR4380b

Accession MIMAT0018287
Description Glycine max gma-miR4380b mature miRNA
Sequence 47 - UAUGGUCAUACGGAUUGUUGAU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20122185
    Prediction of novel miRNAs and associated target genes in Glycine max
    Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
    BMC Bioinformatics (2010) 11:S14