miRBase entry: ath-MIR3933

Stem-loop ath-MIR3933


Accession
MI0016589
Description
Arabidopsis thaliana ath-MIR3933 precursor miRNA


Sequence

cuuagaAGAAGCAAAAUGACGACUCGGacaacaauaauacaaaacuaauacuuauuguugucggagucgucauuuugcaucuucuaag
(((((((((.(((((((((((((((.(((((((((((..............))))))))))).))))))))))))))).)))))))))

Structure
         A               G           uacaaa 
cuuagaAGA GCAAAAUGACGACUC Gacaacaauaa      a
||||||||| ||||||||||||||| |||||||||||       
gaaucuucu cguuuuacugcugag cuguuguuauu      c
         a               g           cauaau 


Annotation confidence Not enough data
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Genome context
chr5: 15758105-15758192 [+]

Database links

Mature ath-miR3933

Accession MIMAT0018348
Description Arabidopsis thaliana ath-miR3933 mature miRNA
Sequence 7 - AGAAGCAAAAUGACGACUCGG - 27
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20621980
    siRNAs from miRNA sites mediate DNA methylation of target genes
    "Chellappan P, Xia J, Zhou X, Gao S, Zhang X, Coutino G, Vazquez F, Zhang W, Jin H"
    "Nucleic Acids Res (2010) 38:6883-6894