Stem-loop far-MIR159

Accession

MI0016603

Description

Festuca arundinacea far-MIR159 precursor miRNA

Gene family

MIPF0000010; MIR159

Sequence

guuugguuuugagguggagcuccuaucauuccaaugaaaggucuugcuaggaggggugguacagcugcucguucaugguucccacuauccuaccuccguuugaaaccagggagauaggccuguggcuagcaugaccgaggagccgcaucguccccucgcuggccgcucUUUGGAUUGAAGGGAGCUCUGcaucuuggccu
....((((..((.(((((((((((.(((.(((((.((..((((..((...((((((((((.(.(((.((((.(((((.(..((((...((((.((((.(........).)))).))))...))))..).))))).)))).))).).)))).)))))))).))))..)).))))).))).))))))))))).))..)))).

Structure

guuu    uu  g           a   u     u  aa    uu  uag      -    a a   g    u     g uc    uau    c    g uug 
    gguu  ga guggagcuccu uca uccaa ga  gguc  gc   gagggg uggu c gcu cucg ucaug u  ccac   ccua cucc u   a
    ||||  || ||||||||||| ||| ||||| ||  ||||  ||   |||||| |||| | ||| |||| ||||| |  ||||   |||| |||| |    
    ccgg  cu cGUCUCGAGGG AGU AGGUU cu  ccgg  cg   cucccc gcua g cga gagc aguac a  ggug   ggau gagg a   a
---u    uu  a           A   U     U  cg    -u  ---      u    c c   g    c     g uc    ucc    a    g cca 

Annotation confidence Not enough data

Genome context

Unknown

Mature far-miR159

• Accession: MIMAT0018362
• Description: Festuca arundinacea far-miR159 mature miRNA
• Sequence: 169 - UUUGGAUUGAAGGGAGCUCUG - 189
• Evidence: not_experimental

References

1. PubMed ID: 20213187
   Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application
   "Unver T, Bakar M, Shearman RC, Budak H"
   "Mol Genet Genomics (2010) 283:397-413