Stem-loop far-MIR160

Accession

MI0016604

Description

Festuca arundinacea far-MIR160 precursor miRNA

Gene family

MIPF0000032; MIR160

Sequence

uuguugcugauggggacaugaccuucgcaugccugucucagcucgucgugcaUGCCUGGCUCCCUGUAUGCCAcacauguccuagugguuugcugguuggcugguguguugaggguucagaacaauccauuagucaguuggaauuugu
.....((((((((((.((((.......))))))(((((.(((((.(((.(((((((.((((.((.(((.(((((..........))))).))).))..))))))))))))))))))).)).)))..))))))))..............

Structure

---------uuguu        ggacaugaccuucgcaugcc   -  c     g   u       U    -C  U   U     acau 
              gcugaugg                    ugu cu agcuc ucg gcaUGCC GGCU  CC GUA GCCAc    g
              ||||||||                    ||| || ||||| ||| ||||||| ||||  || ||| |||||     
              ugauuacc                    aca ga uuggg agu ugugugg ucgg  gg cgu uggug    u
uguuuaagguugac        ------------------ua   a  c     -   -       -    uu  u   u     aucc 

Annotation confidence Not enough data

Genome context

Unknown

Mature far-miR160

• Accession: MIMAT0018363
• Description: Festuca arundinacea far-miR160 mature miRNA
• Sequence: 53 - UGCCUGGCUCCCUGUAUGCCA - 73
• Evidence: not_experimental

References

1. PubMed ID: 20213187
   Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application
   "Unver T, Bakar M, Shearman RC, Budak H"
   "Mol Genet Genomics (2010) 283:397-413