Stem-loop far-MIR156a

Accession

MI0016609

Description

Festuca arundinacea far-MIR156a precursor miRNA

Gene family

MIPF0000008; MIR156

Sequence

gcagaccgauggucguggcuggcaccguggguggugguaucccauggcugaguUGACAGAAGAGAGAGAGCACAgcuggagucgguggcgaccccugugagacacccgccuggagggagcucuggaccggggaagccguggcugccauaugcaugugggccauaacccgugugaggacgc
..........(((.((((((.(((...((.(((.(((((..((((((((.....................(((((..((.((((....))))))))))).....((((.((((((....))))))..))))..)))))))).)))))))).))))).)))))).))).((((....))))

Structure

---gcagaccgau   c      g   ccg  g   g     uc        -------------gaguUGACAGAAGAGAGAGAG     cu  a    g 
             ggu guggcu gca   ug gug uggua  ccauggcu                                  CACAg  gg gucg u
             ||| |||||| |||   || ||| |||||  ||||||||                                  |||||  || ||||  
             cca uaccgg ugu   ac uau accgu  ggugccga                                  guguc  cc cagc g
cgcaggagugugc   a      g   ---  g   -     -c        aggggccaggucucgagggagguccgcccacaga     --  -    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature far-miR156a

• Accession: MIMAT0018368
• Description: Festuca arundinacea far-miR156a mature miRNA
• Sequence: 54 - UGACAGAAGAGAGAGAGCACA - 74
• Evidence: not_experimental

References

1. PubMed ID: 20213187
   Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application
   "Unver T, Bakar M, Shearman RC, Budak H"
   "Mol Genet Genomics (2010) 283:397-413