Stem-loop far-MIR166

Accession

MI0016616

Description

Festuca arundinacea far-MIR166 precursor miRNA

Gene family

MIPF0000004; MIR166

Sequence

uuucggcaacuuuggcaggcuccaugccuacgaggccgcaagcucgcgcagcuauacccgcgcaaccaugcgagauggcaaugauuccaauggaauCCGGACCAGGCUUCAUCCCAGgcauuuggccucgugcc
.............((((((((..((((((..((((((((......))...(((((.(.((((......)))).))))))...((((((...)))))).......)))))).....))))))..))))...))))

Structure

uuucggcaacuuu    ---    cc      ---ac      gcaagcucgcgcagcuauacccgcgcaaccaugcgagauggcaau      a 
             ggca   ggcu  augccu     gaggcc                                             gauucc  
             ||||   ||||  ||||||     ||||||                                             |||||| a
             ccgu   ccgg  uacgGA     CUUCGG                                             Cuaagg  
-------------    gcu    uu      CCCUA      --------------------------------------ACCAGGC      u 

Annotation confidence Not enough data

Genome context

Unknown

Mature far-miR166

• Accession: MIMAT0018375
• Description: Festuca arundinacea far-miR166 mature miRNA
• Sequence: 97 - CCGGACCAGGCUUCAUCCCAG - 117
• Evidence: not_experimental

References

1. PubMed ID: 20213187
   Genome-wide profiling and analysis of Festuca arundinacea miRNAs and transcriptomes in response to foliar glyphosate application
   "Unver T, Bakar M, Shearman RC, Budak H"
   "Mol Genet Genomics (2010) 283:397-413