Stem-loop sequence hsa-mir-4435-1

Accession

MI0016775 (change log)

Symbol

HGNC:MIR4435-1

Description

Homo sapiens miR-4435-1 stem-loop

Gene family

MIPF0001220; mir-4435

Literature search

8 open access papers mention hsa-mir-4435-1
(56 sentences)

Stem-loop

   a    gcaaa     ---a   c      aga   a    u 
5'  ggca     uggcc    gag ucacac   ggg ugag g
    ||||     |||||    ||| ||||||   ||| |||| c
3'  ucgu     accgg    cuc agugug   ucc acuu a
   a    agaca     acga   -      acg   -    c 

Deep sequencing

252 reads, 0 reads per million, 27 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr2: 87629755-87629834 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR4435-1
• HGNC:MIR4435-1
• RNAcentral:URS000075D7A1_9606
• miRBase Tracker:MI0016775

Mature sequence hsa-miR-4435

• Accession: MIMAT0018951
• Sequence: 10 - auggccagagcucacacagagg - 31
• Deep sequencing: 490 reads, 27 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00002BBA1C_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4435
  • TargetScanVert:hsa-miR-4435
  • miRDB:hsa-miR-4435

References

1. PMID:20733160 "Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs" Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Blood. 116:e118-e127(2010).