Stem-loop sequence hsa-mir-4444-1

Accession

MI0016787 (change log)

Previous IDs

hsa-mir-4444

Symbol

HGNC:MIR4444-1

Description

Homo sapiens miR-4444-1 stem-loop

Gene family

MIPF0001310; mir-4444

Stem-loop

   -g   c      c c          -u    -  c ca 
5'   uga gacugg c cgccucuucc  cucg gu c  u
     ||| |||||| | ||||||||||  |||| || |   
3'   acu cuggcc g gcggagaagg  gagc ca g  a
   aa   -      u a          uu    u  a uu 

Deep sequencing

648 reads, 9.09 reads per million, 121 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr2: 177212726-177212799 [+]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:MIR4444
• HGNC:MIR4444-1
• RNAcentral:URS000075B866_9606
• miRBase Tracker:MI0016787

Mature sequence hsa-miR-4444

• Accession: MIMAT0018962
• Sequence: 43 - cucgaguuggaagaggcg - 60
• Deep sequencing: 868 reads, 100 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00002A82B3_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4444
  • TargetScanVert:hsa-miR-4444
  • miRDB:hsa-miR-4444

References

1. PMID:20733160 "Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs" Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Blood. 116:e118-e127(2010).