Stem-loop sequence hsa-mir-4458

Accession

MI0016804 (change log)

Symbol

HGNC:MIR4458

Description

Homo sapiens miR-4458 stem-loop

Literature search

4 open access papers mention hsa-mir-4458
(6 sentences)

Stem-loop

   g       aga     -      -a    ag     c 
5'  agcgcac   gguag gugugg  agaa  ugaaa a
    |||||||   ||||| ||||||  ||||  ||||| c
3'  ucgugug   ucguc cacauu  uuuu  auuuu u
   g       gug     u      ga    gg     a 

Deep sequencing

1614 reads, 0 reads per million, 56 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr5: 8460925-8460999 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000470995 ; RP11-480D4.3-003; exon 2

  ENST00000606459 ; MIR4458HG-003; exon 2

Database links

• EntrezGene:MIR4458
• HGNC:MIR4458
• RNAcentral:URS000075DE80_9606
• miRBase Tracker:MI0016804

Mature sequence hsa-miR-4458

• Accession: MIMAT0018980
• Sequence: 9 - agagguagguguggaagaa - 27
• Deep sequencing: 1602 reads, 55 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS000032EF64_9606
• Predicted targets:
  • TargetMiner:hsa-miR-4458
  • TargetScanVert:hsa-miR-4458
  • miRDB:hsa-miR-4458

References

1. PMID:20733160 "Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs" Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI, Blood. 116:e118-e127(2010).