Stem-loop hsa-mir-548x-2

Accession

MI0016833

Symbol

HGNC: MIR548X2

Description

Homo sapiens hsa-mir-548x-2 precursor miRNA

Literature search

41 open access papers mention hsa-mir-548x-2
(143 sentences)

Sequence

548 reads, 5.0 reads per million, 89 experiments

augccaaauauuagguuggcacAAAAGUAAUUGUGGCUUUUgccauuaaaaguaaugguAAAAACUGCAAUUACUUUcgugccaaccuaauauuugugug
..((((((((((((((((((((.(((((((((((((.(((((((((((....))))))))))).))))))))))))).)))))))))))))))))).)).

Structure

au  -                  A             C           a 
  gc caaauauuagguuggcac AAAGUAAUUGUGG UUUUgccauua a
  || |||||||||||||||||| ||||||||||||| |||||||||||  
  ug guuuauaauccaaccgug UUUCAUUAACGUC AAAAugguaau a
-g  u                  c             A           g 

Annotation confidence Medium

Genome context

chr13: 65966330-65966429 [-]

Mature hsa-miR-548x-2-5p

• Accession: MIMAT0050628
• Description: Homo sapiens hsa-miR-548x-2-5p mature miRNA
• Sequence: 23 - AAAAGUAAUUGUGGCUUUU - 41
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-548x-2-3p

• Accession: MIMAT0015081
• Description: Homo sapiens hsa-miR-548x-2-3p mature miRNA
• Sequence: 60 - AAAAACUGCAAUUACUUU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20733160
   Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
   "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
   "Blood (2010) 116:e118-e127