Stem-loop oar-mir-758

Accession

MI0016924

Description

Ovis aries oar-mir-758 precursor miRNA

Gene family

MIPF0000126; mir-379

Sequence

445 reads, 158 reads per million, 13 experiments

cacgugccuggguacaugaggUGGUUGACCAGAGAGCACACGcuucauuugugccgUUUGUGACCUGGUCCACUAAcccucaguaucuaauccccucuug
........(((((((.(((((((((.((((((.(.(((.((((.........).))).)))..))))))).))))..))))))))))))...........

Structure

---cacgugcc       a     --    U      A -A   C   - uuc 
           uggguac ugagg  UGGU GACCAG G  GCA ACG c   a
           ||||||| |||||  |||| |||||| |  ||| ||| |   u
           aucuaug acucc  AUCA CUGGUC C  UGU Ugc g   u
guucuccccua       -     cA    C      - AG   U   c ugu 

Annotation confidence High

Genome context

chr18: 64525175-64525274 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from oar-mir-758

Mature oar-miR-758-5p

• Accession: MIMAT0019261
• Description: Ovis aries oar-miR-758-5p mature miRNA
• Sequence: 22 - UGGUUGACCAGAGAGCACACG - 42
• Evidence: experimental ; Illumina [1]

Mature oar-miR-758-3p

• Accession: MIMAT0019262
• Description: Ovis aries oar-miR-758-3p mature miRNA
• Sequence: 57 - UUUGUGACCUGGUCCACUAA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662