miRBase entry: oar-mir-376d

Stem-loop oar-mir-376d


Accession
MI0016934
Description
Ovis aries oar-mir-376d precursor miRNA
Gene family
MIPF0000091; mir-368


Sequence

7969 reads, 1933 reads per million, 13 experiments
gggauccauccuguuugguauuuaaaagguagauuuuccuucuaugguuacggguuuggugauuaAUCAUAGAGGAAAAUCCACAUuuucaguaucaaaugcugcuuugg
((((....))))((((((((((.((((.((.(((((((((.(((((((((...(((....))))))))))))))))))))).)).)))).))))))))))..........

Structure
gggauccauccu          u    g  a         u         cgg   u 
            guuugguauu aaaa gu gauuuuccu cuaugguua   guu g
            |||||||||| |||| || ||||||||| |||||||||   |||  
            uaaacuauga uuuU CA CUAAAAGGA GAUACUAau   uag g
--gguuucgucg          c    A  C         -         ---   u 


Annotation confidence Not enough data
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Genome context
chr18: 64538218-64538327 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from oar-mir-376d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-376d

Accession MIMAT0019281
Description Ovis aries oar-miR-376d mature miRNA
Sequence 66 - AUCAUAGAGGAAAAUCCACAU - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20944086
    Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
    "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
    "Genome Res (2010) 20:1651-1662