Stem-loop oar-mir-376a

Accession

MI0016937

Description

Ovis aries oar-mir-376a precursor miRNA

Gene family

MIPF0000091; mir-368

Literature search

3 open access papers mention oar-mir-376a
(4 sentences)

Sequence

8285 reads, 1823 reads per million, 13 experiments

uccuucuuugguauuuaaaaggUAGAUUCUCCUUCUAUGAGUACauuauuuacgauuaAUCAUAGAGGAAAAUCCACGUuuucaguaucaaaugcugcuugga
......(((((((((.((((.((.((((.((((.((((((....(((......)))...)))))))))).)))).)).)))).)))))))))...........

Structure

-----uccuuc         u    g  A    C    U      GUAC   au 
           uuugguauu aaaa gU GAUU UCCU CUAUGA    auu  u
           ||||||||| |||| || |||| |||| ||||||    |||   
           aaacuauga uuuU CA CUAA AGGA GAUACU    uag  u
agguucgucgu         c    G  C    A    -      -Aau   ca 

Annotation confidence High

Genome context

chr18: 64538968-64539070 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from oar-mir-376a

Mature oar-miR-376a-5p

• Accession: MIMAT0019286
• Description: Ovis aries oar-miR-376a-5p mature miRNA
• Sequence: 23 - UAGAUUCUCCUUCUAUGAGUAC - 44
• Evidence: experimental ; Illumina [1]

Mature oar-miR-376a-3p

• Accession: MIMAT0019287
• Description: Ovis aries oar-miR-376a-3p mature miRNA
• Sequence: 59 - AUCAUAGAGGAAAAUCCACGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662