Stem-loop oar-mir-487b

Accession

MI0016941

Description

Ovis aries oar-mir-487b precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

4088 reads, 834 reads per million, 13 experiments

ugcuaaccuuugguacuuggagAGUGGUUAUCCCUGUCCUGUUCguuuuacucaugucgAAUCGUACAGGGUCAUCCACUUuuucaguaucaagagcgcagaccgua
.(((....(((((((((.(((((((((....((((((.(.(((((............))))).).))))))....))))))))).))))))))))))..........

Structure

---------u   aacc         u         UUAU      C U     uuuua 
          gcu    uuugguacu ggagAGUGG    CCCUGU C GUUCg     c
          |||    ||||||||| |||||||||    |||||| | |||||      
          cga    gaacuauga uuuUUCACC    GGGACA G UAAgc     u
augccagacg   ----         c         UACU      U C     uguac 

Annotation confidence Not enough data

Genome context

chr18: 64543093-64543199 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from oar-mir-487b

Mature oar-miR-487b-5p

• Accession: MIMAT0019294
• Description: Ovis aries oar-miR-487b-5p mature miRNA
• Sequence: 23 - AGUGGUUAUCCCUGUCCUGUUC - 44
• Evidence: experimental ; Illumina [1]

Mature oar-miR-487b-3p

• Accession: MIMAT0019295
• Description: Ovis aries oar-miR-487b-3p mature miRNA
• Sequence: 60 - AAUCGUACAGGGUCAUCCACUU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20944086
   Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
   "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
   "Genome Res (2010) 20:1651-1662