Accession
MI0016942
Description
Ovis aries
oar-mir-539 precursor miRNA
Gene family
MIPF0000018;
mir-154
Sequence
75
reads,
49
reads per million, 10 experiments
cacgucgcuaucucauacuugaggAGAAAUUAUCCUUGGUGUGUUCacuuuauuugggaugAAUCAUACAAGGACAAUUUCUUUuugaguaucaaauccugccucggcgg
..............(((((((((((((((((.((((((.(((((((((((.....))).)))).)))))))))).)))))))))))))))))......((((....))))
..............(((((((((((((((((.((((((.(((((((((((.....))).)))).)))))))))).)))))))))))))))))......((((....))))
Structure
----cacgucgcuaucuc A G - - u
auacuugaggAGAAAUU UCCUUG UGUG UUCa cuu a
||||||||||||||||| |||||| |||| |||| ||| u
uaugaguuUUUCUUUAA AGGAAC AUAC AAgu ggg u
ggcggcuccguccuaaac C - U a u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr18: 64543862-64543971 [+]
Clustered miRNAs
20 other miRNAs are < 10 kb from oar-mir-539
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature oar-miR-539-5p
| Accession | MIMAT0019296 |
| Description | Ovis aries oar-miR-539-5p mature miRNA |
| Sequence | 25 - AGAAAUUAUCCUUGGUGUGUUC - 46 |
| Evidence |
experimental
Illumina [1] |
Mature oar-miR-539-3p
| Accession | MIMAT0019297 |
| Description | Ovis aries oar-miR-539-3p mature miRNA |
| Sequence | 62 - AAUCAUACAAGGACAAUUUCUUU - 84 |
| Evidence |
experimental
Illumina [1] |
References
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