miRBase entry: oar-mir-369

Stem-loop oar-mir-369


Accession
MI0016960
Description
Ovis aries oar-mir-369 precursor miRNA
Gene family
MIPF0000018; mir-154

Literature search
1 open access papers mention oar-mir-369
(1 sentences)

Sequence

2531 reads, 575 reads per million, 13 experiments
agcaucucuccugguaccugaagggAGAUCGACCGUGUUAUAUUCGcuuuauugacuucgAAUAAUACAUGGUUGAUCUUUucucaguaucaaaucucaccuuggag
.......((((((((((.(((.((((((((((((((((..((((((............))))))..)))))))))))))))).)))))))))...........))))

Structure
agcaucu    -----------      c   a                UA      cuuua 
       cucc           ugguac uga gggAGAUCGACCGUGU  UAUUCG     u
       ||||           |||||| ||| ||||||||||||||||  ||||||      
       gagg           acuaug acu uUUUCUAGUUGGUACA  AUAAgc     u
-------    uuccacucuaa      -   c                UA      uucag 


Annotation confidence High
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Genome context
chr18: 64562459-64562565 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from oar-mir-369
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oar-miR-369-5p

Accession MIMAT0019331
Description Ovis aries oar-miR-369-5p mature miRNA
Sequence 26 - AGAUCGACCGUGUUAUAUUCG - 46
Evidence experimental
Illumina [1]

Mature oar-miR-369-3p

Accession MIMAT0019332
Description Ovis aries oar-miR-369-3p mature miRNA
Sequence 61 - AAUAAUACAUGGUUGAUCUUU - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20944086
    Assessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing
    "Caiment F, Charlier C, Hadfield T, Cockett N, Georges M, Baurain D"
    "Genome Res (2010) 20:1651-1662