miRBase entry: mmu-mir-378b

Stem-loop mmu-mir-378b


Accession
MI0016973
Symbol
MGI: Mir378b
Description
Mus musculus mmu-mir-378b precursor miRNA
Gene family
MIPF0000168; mir-378

Literature search
77 open access papers mention mmu-mir-378b
(745 sentences)

Sequence

126752 reads, 380 reads per million, 95 experiments
uguccugggcuaucccaguccaggcaguacccucaggaggcagguacgauggauagagagggaaccCUGGACUUGGAGUCAGAAGAccugag
.(((...(((..(((.((((((((..((.(((((......((.......))......))))).)))))))))).))))))....))).....

Structure
----u   -cug   ua   c        ca  a     aggagg  gg 
     guc    ggc  ucc aguccagg  gu cccuc      ca  u
     |||    |||  ||| ||||||||  || |||||      ||  a
     cAG    CUG  AGG UCAGGUCc  ca gggag      gu  c
gaguc   AAGA   --   U        --  a     agauag  ag 


Annotation confidence Not enough data
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Genome context
chr11: 88352773-88352864 [+]

Database links

Mature mmu-miR-378b

Accession MIMAT0019348
Description Mus musculus mmu-miR-378b mature miRNA
Sequence 67 - CUGGACUUGGAGUCAGAAGA - 86
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20935160
    Next-generation sequencing identifies the natural killer cell microRNA transcriptome
    "Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER"
    "Genome Res (2010) 20:1590-1604