Stem-loop sequence mmu-mir-101c

Accession

MI0016974 (change log)

Symbol

MGI:Mir101c

Description

Mus musculus miR-101c stem-loop

Literature search

108 open access papers mention mmu-mir-101c
(814 sentences)

Stem-loop

   --------u   g ccuacug      c     augac   c 
5'          gau c       cacagu cugug     uga u
            ||| |       |||||| |||||     |||  
3'          cua g       guguca gacac     acu g
   gucaauccg   - -ucaaua      u     -guca   c 

Deep sequencing

1258874 reads, 2.26e+03 reads per million, 107 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr9: 3038669-3038743 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir101c
• MGI:Mir101c
• RNAcentral:URS000075D671_10090
• miRBase Tracker:MI0016974

Mature sequence mmu-miR-101c

• Accession: MIMAT0019349
• Sequence: 46 - acaguacugugauaacuga - 64
• Deep sequencing: 1258854 reads, 107 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00000661A7_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-101c
  • miRDB:mmu-miR-101c

References

1. PMID:20935160 "Next-generation sequencing identifies the natural killer cell microRNA transcriptome" Fehniger TA, Wylie T, Germino E, Leong JW, Magrini VJ, Koul S, Keppel CR, Schneider SE, Koboldt DC, Sullivan RP, Heinz ME, Crosby SD, Nagarajan R, Ramsingh G, Link DC, Ley TJ, Mardis ER Genome Res. 20:1590-1604(2010).