Stem-loop bgy-MIR529

Accession

MI0016985

Description

Bruguiera gymnorhiza bgy-MIR529 precursor miRNA

Gene family

MIPF0001312; MIR529_2

Sequence

guguuuaucacuuuuccuucuucugggcuuucuaagagaaguuuuucuuguuggguuuuauuuuuguuuauugagcuuggggaggggguuugauucuuguuucuuuuuuagauggguacagagauagaagaaguguugaaGAAGAAGAGAGAUGGUAGAGgc
((.((((((((((((.(((((((.(.((((((((((((((....))))).)))).(((((((((((((((((......(((((.((((......)))).)))))......)))))..))))))))))))))))).).)))))))..))))).))))))).))

Structure

  g       -     -c       u g     cuaagagaaguuuuucuuguuggg            --     gagcuu     g    uu 
gu uuuauca cuuuu  cuucuuc g gcuuu                        uuuuauuuuugu  uuauu      gggga gggg  u
|| ||||||| |||||  ||||||| | |||||                        ||||||||||||  |||||      ||||| ||||   
cg AGAUGGU GAGAG  GAAGaag u ugaag                        aagauagagaca  gguag      ucuuu uucu  g
  G       A     AA       u g     ------------------------            ug     auuuuu     g    ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature bgy-miR529

• Accession: MIMAT0020963
• Description: Bruguiera gymnorhiza bgy-miR529 mature miRNA
• Sequence: 141 - GAAGAAGAGAGAUGGUAGAG - 160
• Evidence: experimental ; Northern [1], RTPCR [1]

References

1. Identification of microRNA precursors in Bruguiera spp.
   "Lee WS, Li LP, Ling HC, Harikrishna JA"
   Botanica Marina. (2011) 54:313-324